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Botsford LW, MOLONEY CL, HASTINGS A, Largier JL, POWELL TM, HIGGINS K, Quinn JF. 1994. THE INFLUENCE OF SPATIALLY AND TEMPORALLY VARYING OCEANOGRAPHIC CONDITIONS ON MEROPLANKTONIC METAPOPULATIONS. DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY. 41:107--145. Abstract

Botsford LW, SMITH BD, Quinn JF. 1994. BIMODALITY IN SIZE DISTRIBUTIONS - THE RED-SEA URCHIN STRONGYLOCENTROTUS-FRANCISCANUS AS AN EXAMPLE. ECOLOGICAL APPLICATIONS. 4:42--50. Abstract

BROWN KM, Quinn JF. 1988. The Effect of wave action on growth in 3 species of intertidal gastropods. OECOLOGIA. 75:420--425.

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CisnerosMata MA, Botsford LW, Quinn JF. 1997. Projecting viability of Totoaba macdonaldi, a population with unknown age-dependent variability. ECOLOGICAL APPLICATIONS. 7:968--980. Abstract

CONNOR VM, Quinn JF. 1984. STIMULATION OF FOOD SPECIES GROWTH BY LIMPET MUCUS. SCIENCE. 225:843--844.

Cook RR, Quinn JF. 1995. THE INFLUENCE OF COLONIZATION IN NESTED SPECIES SUBSETS. OECOLOGIA. 102:413--424. Abstract

Cook RR, Quinn JF. 1998. An evaluation of randomization models for nested species subsets analysis. OECOLOGIA. 113:584--592. Abstract

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Girvetz EH, Thorne JH, Quinn JF, McCoy MC. 2008. Early Biological Mitigation Needs Assessment: Elkhorn Slough Pilot Project.. Caltrans.

GROSBERG RK, Quinn JF. 1986. THE GENETIC-CONTROL AND CONSEQUENCES OF KIN RECOGNITION BY THE LARVAE OF A COLONIAL MARINE INVERTEBRATE. NATURE. 322:456--459.

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Harrison S, Viers JH, Quinn JF. 2000. Climatic and spatial patterns of diversity in the serpentine plants of California. Diversity & Distributions. 6:153-162.

Harrison S, Quinn JF. 1989. CORRELATED ENVIRONMENTS AND THE PERSISTENCE OF METAPOPULATIONS. OIKOS. 56:293--298.

Harrison S, Quinn JF, BAUGHMAN JF, MURPHY DD, EHRLICH PR. 1991. ESTIMATING THE EFFECTS OF SCIENTIFIC STUDY ON 2 BUTTERFLY POPULATIONS. AMERICAN NATURALIST. 137:227--243. Abstract

Harter T, Lund JR, Darby JL, Fogg GE, Howitt R, Jessoe KK, Pettygrove SG, Quinn JF, Viers JH, Boyle DB et al.. 2012. Addressing Nitrate in California's Drinking Water with a Focus on Tulare Lake Basin and Salinas Valley Groundwater. Report for the State Water Resources Control Board Report to the Legislature.. :78p..

HAYWORTH AM, Quinn JF. 1990. TEMPERATURE OF LIMPETS IN THE ROCKY INTERTIDAL ZONE - EFFECTS OF CAGING AND SUBSTRATUM. LIMNOLOGY AND OCEANOGRAPHY. 35:967--970.

Huber PR, Springer NP, Hollander AD, Brodt S, Tomich TP, Quinn JF. 2015. Indicators of global sustainable sourcing as a set covering problem: an integrated approach to sustainability. Ecosystem Health and Sustainability. 1:1–8. Abstract

Huber GP l EH, Thorne JH, Hollander A, Quinn JF, McCoy. MC. 2008. Early biological mitigation needs assessment: Pleasant Grove pilot project. Caltrans.

Huber PR, Girvetz EH, Thorne JH, Hollander A, Quinn JF, McCoy MC. 2008. Early biological mitigation needs assessment: Pleasant Grove pilot project .

Hunter JC, Willett KB, McCoy MC, Quinn JF, Keller KE. 1999. Prospects for preservation and restoration of riparian forests in the Sacramento Valley, California, USA. ENVIRONMENTAL MANAGEMENT. 24:65--75. Abstract

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Johnson J, Viers JH, Deas M, Quinn J, Roth NE. 2005. Sunrise on the Klamath: Determining Topographic Sunrise and Sunset. ESRI Users Conference.

JUDGE ML, Quinn JF, WOLIN CL. 1988. VARIABILITY IN RECRUITMENT OF BALANUS-GLANDULA (DARWIN, 1854) ALONG THE CENTRAL CALIFORNIA COAST. JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY. 119:235--251.

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Kearney JE, Viers JH, Willet KB, McCoy MC, Quinn JF. 1999. Using GIS to Improve Water Quality Reporting in California. ESRI International User Conference.

Keating KA, Quinn JF, Ivie MA, Ivie LL. 1998. Estimating the effectiveness of further sampling in species inventories. ECOLOGICAL APPLICATIONS. 8:1239--1249. Abstract

Keating KA, Quinn JF. 1998. Estimating species richness: the Michaelis-Menten model revisited. OIKOS. 81:411--416. Abstract

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LEIGH EG, PAINE RT, Quinn JF, SUCHANEK TH. 1987. WAVE ENERGY AND INTERTIDAL PRODUCTIVITY. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 84:1314--1318.

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Maynard CN, Howell CA, Quinn JF. 2009. Comparing alternative systematic conservation planning strategies against a politically-driven conservation plan. Biodiversity and Conservation. 18:3061-3083.