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2011
Thode, A, van Wagtendonk J, Miller JD, Quinn JF.  2011.  Quantifying the Fire Regime Distributions for Severity in Yosemite National Park, California, USA. International Journal of Wildland Fire. 20:223-239.
2010
Underwood, EC, Quinn JF.  2010.  Response of ants and spiders to prescribed fire in oak woodlands of California. Journal of Insect Conservation. 14:359-366.
Waetjen, DP, Thorne JH, Hollander AH, Shapiro AM, Quinn JF.  2010.  The Butterfly Effect: An Approach to Web-Based Scientific Data Distribution and Management with Linkages to Climate Data and the Semantic Web. Abstract
2009
Maynard, CN, Howell CA, Quinn JF.  2009.  Comparing alternative systematic conservation planning strategies against a politically-driven conservation plan. Biodiversity and Conservation. 18:3061-3083.
2007
Pettler, A, Erickson G, Quinn JF, Meese RJ, Shilling F.  2007.  An Analytical Framework for Wildlife Crossing Policy in California. ICOET 2007 -- Little Rock, Arkansas.
Meynard, CN, Quinn JF.  2007.  Predicting species distributions: a critical comparison of the most common statistical models using artificial species.. Journal of Biogeography. 34:1455-1469.
2005
Thorne, JH, McCoy MC, Hollander A, Roth NE, Quinn JF.  2005.  Regional analysis for transportation corridor planning. ICOET 2005.
2002
McCoy, MC, Quinn JF, Kalman NB.  2002.  Identifying environmental and agricultural values and opportunities for regional planning: a GIS approach. ESRI User Conference Proceedings.
1999
Shook, CD, Madison ME, Willett KW, Quinn JF, McCoy MC.  1999.  Applied Geographic Information Systems in Cooperative Natural Resource Projects: A California Example. ESRI International Users Conference.