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2008
Meynard, CN, Quinn JF.  2008.  Bird metacommunities in the temperate forests of South America: direct and indirect effects of vegetation structure, area and climate. Ecology. 89:981-990.
Girvetz, EH, Thorne JH, Quinn JF, McCoy MC.  2008.  Early Biological Mitigation Needs Assessment: Elkhorn Slough Pilot Project.. Caltrans.
Huber, GP l EH, Thorne JH, Hollander A, Quinn JF, McCoy. MC.  2008.  Early biological mitigation needs assessment: Pleasant Grove pilot project. Caltrans.
2006
Thorne, JH, Gao SY, Hollander AD, Kennedy JA, McCoy M, Johnston RA, Quinn JF.  2006.  Modeling potential species richness and urban buildout to identify mitigation sites along a California highway. TRANSPORTATION RESEARCH PART D-TRANSPORT AND ENVIRONMENT. 11:277--291. Abstract
Thorne, JH, Cameron D, Quinn JF.  2006.  A conservation design for the central coast of California and the evaluation of mountain lion as an umbrella species. NATURAL AREAS JOURNAL. 26:137--148. Abstract
Viers, JH, Thorne JH, Quinn JF.  2006.  CalJep: A Spatial Distribution Database of CalFlora and Jepson. San Francisco Estuary & Watershed Science. 4(1):1.
2004
Thorne, JH, Kennedy JA, Keeler-Wolf T, Quinn JF, Menke J, McCoy M.  2004.  A New Vegetation Map of Napa County Using the Manual of California Vegetation Classification and its Comparison to Other Digital Vegetation Map. Madroño . 51(4):343-363.
2003
Viers, JH, Ramirez CM, Quinn JF.  2003.  On the uses of hyperspectral data analysis and watershed analytical methods to evaluate the extent of riparian vegetation and habitat in the Navarro River, California.
2002
Viers, JH, Sailer CT, Ramirez CM, Quinn JF, Johnson ML, Green RO.  2002.  An Integrated Approach to the Discrimination of Riparian Vegetation in the Navarro River Watershed. Eleventh JPL Airborne Earth Science Workshop.
2000
Quinn, JB, Quinn JF.  2000.  Forging environmental markets. ISSUES IN SCIENCE AND TECHNOLOGY. 16:45--52.
Harrison, S, Viers JH, Quinn JF.  2000.  Climatic and spatial patterns of diversity in the serpentine plants of California. Diversity & Distributions. 6:153-162.
Viers, JH, Hoyos RV, Mullins JC, Lehmer E, Byrne MS, McCoy MC, Quinn JF.  2000.  Watershed Analysis Tool for Environmental Resources: GIS Technology in the New Millennium. ESRI International User Conference.
1999
Hunter, JC, Willett KB, McCoy MC, Quinn JF, Keller KE.  1999.  Prospects for preservation and restoration of riparian forests in the Sacramento Valley, California, USA. ENVIRONMENTAL MANAGEMENT. 24:65--75. Abstract
Kearney, JE, Viers JH, Willet KB, McCoy MC, Quinn JF.  1999.  Using GIS to Improve Water Quality Reporting in California. ESRI International User Conference.
Viers, JH, McCoy MC, Quinn JF, Johnson ML.  1999.  Nonpoint Source Pollution Modeling in the North Coast of California Within a GIS: A Predictive Screening Tool for Watershed Management. ESRI International User Conference.
1998
Keating, KA, Quinn JF, Ivie MA, Ivie LL.  1998.  Estimating the effectiveness of further sampling in species inventories. ECOLOGICAL APPLICATIONS. 8:1239--1249. Abstract
Keating, KA, Quinn JF.  1998.  Estimating species richness: the Michaelis-Menten model revisited. OIKOS. 81:411--416. Abstract
Cook, RR, Quinn JF.  1998.  An evaluation of randomization models for nested species subsets analysis. OECOLOGIA. 113:584--592. Abstract
1997
CisnerosMata, MA, Botsford LW, Quinn JF.  1997.  Projecting viability of Totoaba macdonaldi, a population with unknown age-dependent variability. ECOLOGICAL APPLICATIONS. 7:968--980. Abstract
1995
Wing, SR, Largier JL, Botsford LW, Quinn JF.  1995.  SETTLEMENT AND TRANSPORT OF BENTHIC INVERTEBRATES IN AN INTERMITTENT UPWELLING REGION. LIMNOLOGY AND OCEANOGRAPHY. 40:316--329. Abstract
Cook, RR, Quinn JF.  1995.  THE INFLUENCE OF COLONIZATION IN NESTED SPECIES SUBSETS. OECOLOGIA. 102:413--424. Abstract
ROBINSON, GR, Quinn JF, STANTON ML.  1995.  INVASIBILITY OF EXPERIMENTAL HABITAT ISLANDS IN A CALIFORNIA WINTER ANNUAL GRASSLAND. ECOLOGY. 76:786--794. Abstract
STOHLGREN, TJ, Quinn JF, Ruggiero M, WAGGONER GS.  1995.  STATUS OF BIOTIC INVENTORIES IN US NATIONAL-PARKS. BIOLOGICAL CONSERVATION. 71:97--106. Abstract
1994
Botsford, LW, SMITH BD, Quinn JF.  1994.  BIMODALITY IN SIZE DISTRIBUTIONS - THE RED-SEA URCHIN STRONGYLOCENTROTUS-FRANCISCANUS AS AN EXAMPLE. ECOLOGICAL APPLICATIONS. 4:42--50. Abstract
Botsford, LW, MOLONEY CL, HASTINGS A, Largier JL, POWELL TM, HIGGINS K, Quinn JF.  1994.  THE INFLUENCE OF SPATIALLY AND TEMPORALLY VARYING OCEANOGRAPHIC CONDITIONS ON MEROPLANKTONIC METAPOPULATIONS. DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY. 41:107--145. Abstract